DRX003664
ChIP-seq WCE Th2 (3 days)

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Blood
Cell type
CD4+ T cells
NA
NA

Attributes by original data submitter

Sample

sample_name
DRS003824
sample comment
Mouse naïve CD4 T cells were stimulated under Th2 conditions for 3 days, this sample is whole cell extract as ChIP-seq cotrol.

Sequenced DNA Library

library_name
ChIP-seq WCE Th2 (3 days)
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
11328202
Reads aligned (%)
80.0
Duplicates removed (%)
14.1
Number of peaks
421 (qval < 1E-05)

mm9

Number of total reads
11328202
Reads aligned (%)
79.8
Duplicates removed (%)
14.3
Number of peaks
477 (qval < 1E-05)

Base call quality data from DBCLS SRA