Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Unclassified
Antigen
Unclassified

Cell type

Cell type Class
Blood
Cell type
ML-2
Primary Tissue
Bone Marrow
Tissue Diagnosis
Leukemia Acute Myelogenous

Attributes by original data submitter

Sample

sample_name
DRS001421
sample comment
Genomic DNAs were obtained from the ML-2 human leukemia cell line, which expresses the MLL-AF6 fusion protein but not the wild type MLL protein. The sheared DNAs were analyzed by deep sequencing.

Sequenced DNA Library

library_name
ML-2_Input
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

hg38

Number of total reads
43377503
Reads aligned (%)
92.1
Duplicates removed (%)
9.4
Number of peaks
1314 (qval < 1E-05)

hg19

Number of total reads
43377503
Reads aligned (%)
91.2
Duplicates removed (%)
10.6
Number of peaks
1480 (qval < 1E-05)

Base call quality data from DBCLS SRA