Antigen

Antigen Class

Unclassified

Antigen

Unclassified

Cell type

Cell type Class

Blood

Cell type

ML-2

Primary Tissue

Bone Marrow

Tissue Diagnosis

Leukemia Acute Myelogenous

Sample

sample_name

DRS001420

sample comment

Genomic DNAs were obtained from the ML-2 human leukemia cell line, which expresses the MLL-AF6 fusion protein but not the wild type MLL protein. DPD was performed using the recombinant MBD domain and the precipitated DNAs were analyzed by deep sequencing.

Sequenced DNA Library

library_name

ML-2_MBD

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

Sequencing Platform

instrument_model

Illumina Genome Analyzer IIx

hg38

Number of total reads

37408793

Reads aligned (%)

92.6

Duplicates removed (%)

23.0

Number of peaks

12787 (qval < 1E-05)

hg19

Number of total reads

37408793

Reads aligned (%)

91.6

Duplicates removed (%)

24.3

Number of peaks

12914 (qval < 1E-05)