Curated Sample Data


Genome
hg19
Antigen Class
Histone
Antigen
H3K36me3
Cell type Class
Blood
Cell type
ML-2

Cell type information


Primary Tissue
Bone Marrow
Tissue Diagnosis
Leukemia Acute Myelogenous

Attributes by Original Data Submitter


sample_name
DRS001416
sample comment
Chromatin was obtained from the ML-2 human leukemia cell line, which expresses the MLL-AF6 fusion protein but not the wild type MLL protein. ChIP was performed using anti-H3K36me3 antibody and the precipitated DNAs were analyzed by deep sequencing.

Metadata from Sequence Read Archive

Library Description


library_name
H3K36me3
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Platform Information


instrument_model
Illumina Genome Analyzer IIx

External Database Query

Logs in read processing pipeline


Number of total reads
54294776
Reads aligned (%)
83.1
Duplicates removed (%)
9.5
Number of peaks
1827 (qval < 1E-05)

Sequence Quality Data from DBCLS SRA